BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E12LP1|AL429421
(907 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig644 1729 0.0
>3x_Contig644
Length = 3211
Score = 1729 bits (871), Expect = 0.0
Identities = 898/907 (99%), Gaps = 1/907 (0%)
Strand = Plus / Minus
Query: 1 gatccacaataagttacacctagaaaacgccaaacgagacgggatgttaatattacttaa 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2203 gatccacaataagtaacacctagaaaacgccaaacgagacgggatgttaatattacttaa 2144
Query: 61 atattacactgattcctttgcattcaaagtatccctttgtcatatatggctttcaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2143 atattacactgattcctttgcattcaaagtatccctttgtcatatatggctttcaatctt 2084
Query: 121 agcataagagtaacttatattgcttgtatctttcgagcaatgaggtttgtcgatttaacc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2083 agcataagag-aacttatattgcttgtatctttcgagcaatgaggtttgtcgatttaacc 2025
Query: 181 gttaatatgtaattattttatttgtctttatcaatcagcattatttcctataatttcact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2024 gttaatatgtaattattttatttgtctttatcaatcagcattatttcctataatttcact 1965
Query: 241 tttagtccgttatctttgaatgtaggccaaaaatataaaacgattcaaattttcaaacca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1964 tttagtccgttatctttgaatgtaggccaaaaatataaaacgattcaaattttcaaacca 1905
Query: 301 gaaatgacctattaatggaagaccaaataacaaagcttcccaaatagcgttatcatcgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1904 gaaatgacctattaatggaagaccaaataacaaagcttcccaaatagcgttatcatcgtc 1845
Query: 361 agttgtataccatagagcatgtccgacgggcaaccttaacgtggatgacgtcagaagtat 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1844 agtggtataccatagagcatgtccgacgggcaaccttaacgtggatgacgtcagaagtat 1785
Query: 421 cttattcttcaaaagtcaatatacgtaacaatttaaaatcatagtatttaattatatatt 480
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1784 cttattcttcaaaagtcaatatacgtaacaattgaaaatcatagtattgaattatatatt 1725
Query: 481 actaccaaggaaactgaaaactggacgttaatggtaagctcgtgcgttccattagtcact 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1724 actaccaaggaaactgaaaactggacgttaatggtaagctcgtgcgtgccattagtcact 1665
Query: 541 gttatccctgttatcagtggaatcaatatcaaattctatagaacaaacgctttttggcgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1664 gttatccctgttatcagtggaatcaatatcaaattctatagaacaaacgctttttggcgg 1605
Query: 601 ttaaacagacaaaataattccacatcttccttttcatcttctcagctctccactgaaata 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1604 ttaaacagacaaaataattccacatcttccttttcatcttctcagctctccactgaaata 1545
Query: 661 ttaattgccaatatcattctgcttcctgaatttgcccttgacaatgaaaaggtattttgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1544 ttaattgccaatatcattctgcttcctgaatttgcccttgacaatgaaaaggtattttgc 1485
Query: 721 aaaacaacttcacagattgaagaacagccttcgacatctactgtctatagcgtactacga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1484 aaaacaacttcacagattgaagaacagccttcgacatctactgtctatagcgtactacga 1425
Query: 781 aaaaactaaagggccattgagctgagttctggaaacctttttggttctgcagccaaaatc 840
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1424 aaaaactaaagggccattgagctgagtgctggaaacctttttggttctgcagccaaaatc 1365
Query: 841 gacgtwatcttcttcctctaaggattttcgccattcgcgtttcctctcacaattagcgty 900
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1364 gacgtaatcttcttcctctaaggattttcgccattcgcgtttcctctcacaattagcgtc 1305
Query: 901 attgtct 907
|||||||
Sbjct: 1304 attgtct 1298
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7745
Number of Sequences: 1807
Number of extensions: 7745
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 907
length of database: 10,358,551
effective HSP length: 16
effective length of query: 891
effective length of database: 10,329,639
effective search space: 9203708349
effective search space used: 9203708349
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)